Just a moment, the page is loading...
Browse ALL STUDIES
Keyword Search
View All Selected
Clear All
Login / Create Account
Login
Create Account
Home
About Us
Privacy Policy
Minimum System Requirements
How To Join
Mission
Data Sponsors
Researchers
How It Works
How to Request Data
Review of Requests
Data Sharing Agreement
Access to Data
Independent Review Panel
Metrics
FAQs
News
Help/Contact Us
Development of personalised predictive models for the evolution of atopic dermatitis severity in response to treatment
Proposal
11298
Title of Proposed Research
Development of personalised predictive models for the evolution of atopic dermatitis severity in response to treatment
Lead Researcher
Reiko Tanaka
Affiliation
Department of Bioengineering, Imperial College London
Funding Source
Potential Conflicts of Interest
Data Sharing Agreement Date
24 March 2020
Lay Summary
Atopic dermatitis (AD) is a chronic skin disease characterised by recurrent itchy skin inflammation that can severely impact the patients' quality of life. Current treatments aim to manage chronic AD symptoms by preventing exacerbations, mainly using topical corticosteroids, emollients, and systemic therapies. However, successful control of AD symptoms is challenging due to considerable variance in responses to AD treatment between patients. Personalised treatment strategies are considered to be more beneficial to individual patients rather than a “one-size-fits-all” approach to therapy.A first step toward developing personalised treatment strategies is to predict the consequences of possible treatments at an “individual level”. Assessing the average effects at a population level cannot deal with the variability across patients, and is not sufficient for personalised medicine. Predicting the treatment effects earlier and switching to other treatments if needed will help improve the efficacy for successful control of AD symptoms. However, there is currently no systematic method to predict AD treatment effects at an individual level, although the community has a large amount of data already accumulated from clinical studies. This project aims to develop a method to predict treatment effects at an individual level and to stratify patients based on treatment effectiveness. This new method will be vital for personalised medicine. Several recent studies have tried to stratify patients based on the effectiveness of some AD treatments, by identifying an association between biomarkers measured prior to the treatment and treatment responses at a single time point in future. However, data from a single time point measurement is likely to be noisy and may not capture the dynamic heterogeneity in AD treatment effects. Some other groups have successfully stratified dynamic disease trajectories of AD occurrence using the longitudinal birth cohort data. However, their proposed stratification is not suitable for designing treatment strategies as they only considered binary outcomes (e.g. presence or absence of an itchy rash) measured on a yearly basis. In this project, we will address this gap and aim to develop a computational model that can predict the consequences of possible treatments at an “individual level”, i.e. the dynamic evolution of disease outcomes (e.g. AD severity scores such as EASI) that are measured over weeks or months, the usual time-scales of interest for the design of personalised treatment plans. We will develop a method to develop personalised predictive models and evaluate its effectiveness using the data to be shared.
Study Data Provided
[{ "PostingID": 19532, "Title": "GSK-FPC117291", "Description": "A randomized, open-label, comparative study to evaluate an intermittent dosing regimen of fluticasone propionate 0.05% cream (twice per week) in reducing the risk of relapse when added to regular daily moisturization using PHYSIOGEL Lotion in paediatric subjects with stabilized atopic dermatitis" },{ "PostingID": 19589, "Title": "GSK-203121", "Description": "Study 203121: A Randomized, Blinded, Vehicle-Controlled, Dose-Finding Study of GSK2894512 Cream for the Treatment of Atopic Dermatitis" },{ "PostingID": 20100, "Title": "GSK-205050", "Description": "Study 205050: A Multicenter, Randomized, Double-Blind, Placebo-Controlled, Parallel-Group Study to Investigate the Efficacy and Safety of Mepolizumab Administered Subcutaneously in Subjects with Moderate to Severe Atopic Dermatitis" }]
Statistical Analysis Plan
We will implement a Bayesian Hidden Markov Model (BHMM) with a Gaussian noise to model the measurement process and a mixed effect Gaussian autoregressive model to model transitions between latent severity states. We will carry out inference using the Hamiltonian Monte-Carlo algorithm as a Markov Chain Monte-Carlo method, and will assess the predictive performance of the model by applying K-fold cross-validation in a forward-chaining setting. We will treat missing values as unknown parameters to be imputed by the Bayesian model in a semi-supervised setting. A key feature of our method is that we develop a machine learning model that learns the patient-specific patterns from the data that comes in gradually over time, e.g. firstly using only the measurement at week 0, and then week 2, etc. rather than using all the available data to develop a single model for “average” patient(s). This unique feature will make this method practically useful in the real clinical setting, where we obtain the data gradually as time goes by. We will develop and test the method using multiple datasets. Our model will serve as a computational platform to combine the information that is accumulated by different clinical trials.
Publication Citation
Duverdier A, Hurault G, Thomas KS, Custovic A, Tanaka RJ. Evaluation of measurement errors in the Patient-Oriented Eczema Measure (POEM) outcome. Clin Exp Allergy 2024; 54: 207-215
DOI:10.1111/cea.14441
© 2024 ideaPoint. All Rights Reserved.
Powered by ideaPoint.
Help
Privacy Policy
Cookie Policy
Help and Resources